Gut Cell Atlas

Image description
Image description

Colon immune atlas

Single cell transcriptomes for 41,650 cells isolated from the caeacum, transverse colon and sigmoid colon of 5 individuals.

Interactive viewer Download .h5ad data Colon_immune_counts.mtx Colon_immune_gene_names.csv Colon_immune_metadata.csv

Fetal Gut Cell Atlas

Single-cell transcriptomes for 62,849 cells isolated from 6-11 weeks post-conception developing human gut. This data includes intestinal cells from duo-jejunum, ileum and colon.

Interactive viewer Download .h5ad data

Paediatric Gut Cell Atlas

Single-cell transcriptomes isolated from terminal ileum of childhood onset Crohn's disease and matched healthy controls. This map includes total of 22,500 cells from 8 control samples and 7 Chron's disease samples.

Interactive viewer Download .h5ad data