Gut Cell Atlas

Fetal and Paediatric Cell Atlas

Single-cell transcriptomes isolated from terminal ileum of childhood onset Crohn's disease and matched healthy controls. This map includes total of 22,500 cells from 8 control samples and 7 Chron's disease samples.

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Single-cell transcriptomes for 62,849 cells isolated from 6-11 weeks post-conception developing human gut. This data includes intestinal cells from duo-jejunum, ileum and colon.

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Colon Immune Atlas

The colon, as a barrier tissue, represents a unique immune environment where immune cells display tolerance toward a diverse community of microbes, which are collectively known as the microbiome.

The published study revealed that not only were there differences between the immune cells in different parts of the colon, but that the microbiome also subtly changed, with a broader range of bacteria further down the colon.

Single cell transcriptomes for 41,650 cells isolated from the caeacum, transverse colon and sigmoid colon of 5 individuals.

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